HyTdb

ADC4EA

HyT-050 | Adamantane | Published 2021.05.13

Basic Information

ethacrynic acid (EA)
linker
Adamantane
POIGSTP1 — Glutathione S-transferase P (GSTP)
Degradation PathwayAutophagy-lysosomal Pathway; Ubiquitin-Proteasome Pathway
Published2021.05.13

Remarks

Chemical Identifiers

SMILESO=C(COC1=CC=C(C(Cl)=C1Cl)C(C(CC)=C)=O)NCCCCNC(CC23C[C@H]4C[C@H](C2)CC(C3)C4)=O
Molecular FormulaC29H38Cl2N2O4
InChIInChI=1S/C29H38Cl2N2O4/c1-3-18(2)28(36)22-6-7-23(27(31)26(22)30)37-17-25(35)33-9-5-4-8-32-24(34)16-29-13-19-10-20(14-29)12-21(11-19)15-29/h6-7,19-21H,2-5,8-17H2,1H3,(H,32,34)(H,33,35)/t19-,20-,21?,29?/m0/s1
InChI KeyZHSWWGFLLWIDIW-QJLYEVAASA-N
IUPAC Name2-(1-adamantyl)-N-[4-[[2-[2,3-dichloro-4-(2-methylidenebutanoyl)phenoxy]acetyl]amino]butyl]acetamide
PubChem CID162653460

Basic Properties

TPSAComputing…
RingsComputing…
FSP3Computing…
Heavy Atom CountComputing…

Lipinski RO5

RO5 ViolationComputing…
MWComputing…
ClogPComputing…
HBDComputing…
HBAComputing…
RBComputing…

Hydrophobic Tag Properties

Tag Structure
Tag TypeAdamantane
Tag SMILESC1(CC2C3)CC(C2)CC3C1
Tag ClogP5.022
HydrophobicityHigh(ClopP>5)

Mechanism of Action

POI (Protein of Interest)

POI NameGlutathione S-transferase P (GSTP)
GeneGSTP1
UniProt IDP09211

Amino Acid Sequence

MPPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGNGKQ

3D Structure (/structures/AF-P09211-F1-model_v6.cif)

Loading /structures/AF-P09211-F1-model_v6.cif …

Function

Catalyzes conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Involved in the formation of glutathione conjugates of both prostaglandin A2 (PGA2) and prostaglandin J2 (PGJ2). Participates in the formation of novel hepoxilin regioisomers. Acts as a negative regulator of ferroptosis by mediating glutathione conjugation and detoxification of 4-hydroxynonenal (4-HNE) reactive aldehyde. Negatively regulates CDK5 activity via p25/p35 translocation to prevent neurodegeneration.

Degradation Pathway

NameAutophagy-lysosomal Pathway
Assay MethodWB

Mechanism

The autophagy-lysosomal pathway (ALP) is capable of degrading a broader range of substrates, including longer-lived and larger misfolded proteins and damaged organelles. ALP is classified into three subtypes: microautophagy, chaperone-mediated autophagy (CMA), and macroautophagy. In microautophagy, substrates are directly sequestered and degraded by lysosomes and late endosomes via membrane protrusion and invagination. In CMA, HSPA8/HSC70 recognizes specific substrates containing KFERQ-like sequences; these substrates subsequently bind to LAMP2A on the lysosomal surface and are delivered into lysosomes for degradation. In macroautophagy, substrates are encapsulated through the formation of double-membrane autophagosomes, which subsequently fuse with lysosomes to degrade the substrates.

Description

when the cells were cotreated with bafilomycin A1, a specific inhibitor of vacuolar type H (+)-ATPase that prevents autophagy at late stage by inhibiting fusion between autophagosomes and lysosomes, the ADC4EA induced GSTP degradation was also greatly reversed. This suggested that in addition to UPP, ADC4EA can also induce GSTP protein degradation through autophagy pathway.

NameUbiquitin-Proteasome Pathway
Assay MethodWB

Mechanism

The ubiquitin-proteasome pathway (UPP) constitutes the principal pathway for protein degradation in eukaryotic cells, mediating the breakdown of target proteins through ubiquitin tagging and subsequent proteasomal degradation. In an ATP-dependent manner, the ubiquitin-activating enzyme (E1) activates ubiquitin (Ub) and conjugates it to a ubiquitin-conjugating enzyme (E2). E3 ligase subsequently catalyzes the transfer of Ub to the target protein, leading to the formation of a polyubiquitin chain that completes the ubiquitination mark. The 19S regulatory particle of the 26S proteasome recognizes this ubiquitination signal and, after deubiquitination, mediates the ATP-dependent delivery of the substrate into the 20S proteasome for degradation.

Description

To further validate that this degradation was processed through the ubiquitin-proteasome pathway (UPP), we used bortezomib, a 20S proteasome inhibitor, to cotreat the cells, and as expected, the degradation induced by ADC4EA was significantly reversed. In addition, the degradation can also be reversed by PYR-41, which is an inhibitor of ubiquitin-activating enzyme E1, suggesting the degradation relies on the ubiquitination of the target protein (Figure 5).

Activity Data

TypeDC50
Value<40 μM
POI NameGSTP
Cell LineHELA
Cell Line IDCVCL_0030
Assay MethodWB
Reference10.1021/acsmedchemlett.0c00627

Description

The most potent compound was ADC4EA, which generated over 80% clearance of GSTP protein at 40 μM.

TypeIC50
Value<80 μM
POI NameGSTP
Cell LineHELA
Cell Line IDCVCL_0030
Assay MethodAnnexin V-FITC and PI double-staining
Reference10.1021/acsmedchemlett.0c00627

Description

we further measured the apoptotic population in the treated cells using flow cytometry. Dose-dependently, ADC4EA induced apoptosis in cells after treatment for 3 h (Figure 7A) . Treatment with 80 μM of ADC4EA has generated 61% apoptotic popular.

Disease Information

DiseaseICD-11Source
endocervical adenocarcinomaXH0GS9Cell Line Origin
Kala-Azar1F54.0Gene-Disease Association