HyTdb

HY8

HyT-045 | O-carborane | Published 2026.03.10

Basic Information

MRTX849
Linker
O-carborane
POIKRAS — Kirsten rat sarcoma viral oncogene homologue(KRAS)
Degradation PathwayUbiquitin-Proteasome Pathway
Published2026.03.10

Remarks

Chemical Identifiers

SMILESN#CC[C@@H]1N(CCN(C1)C2=C3C(CN(CC3)C4=C5C(Cl)=CC=CC5=CC=C4)=NC(OC[C@@H]6N(CCC6)C(CCCCC7=C\B=B\B=B\B=B/B=B/B=B/7)=O)=N2)C(C(F)=C)=O
Molecular FormulaC38H41B10ClFN7O3
InChIInChI=1S/C38H41B10ClFN7O3/c1-25(50)37(59)57-20-19-55(22-28(57)14-16-51)36-30-15-18-54(33-12-5-8-26-7-4-11-31(49)35(26)33)23-32(30)52-38(53-36)60-24-29-10-6-17-56(29)34(58)13-3-2-9-27-21-39-41-43-45-47-48-46-44-42-40-27/h4-5,7-8,11-12,21,28-29H,1-3,6,9-10,13-15,17-20,22-24H2/b27-21-/t28-,29+/m0/s1
InChI KeySNVPZFXRFJBNNL-ICVNALTISA-N
IUPAC NameNA
PubChem CIDNA

Basic Properties

TPSAComputing…
RingsComputing…
FSP3Computing…
Heavy Atom CountComputing…

Lipinski RO5

RO5 ViolationComputing…
MWComputing…
ClogPComputing…
HBDComputing…
HBAComputing…
RBComputing…

Hydrophobic Tag Properties

Tag Structure
Tag TypeO-carborane
Tag SMILESB1=B\B=B\B=B\C=C/B=B/B=B/1
Tag ClogP
Hydrophobicity

Mechanism of Action

POI (Protein of Interest)

POI NameKirsten rat sarcoma viral oncogene homologue(KRAS)
GeneKRAS
UniProt IDP01116

Amino Acid Sequence

MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM

3D Structure (/structures/AF-P01116-F1-model_v6.cif)

Loading /structures/AF-P01116-F1-model_v6.cif …

Function

Signal transducer in the Ras-MAPK signaling pathway that regulates cell proliferation and survival Ras proteins bind GDP/GTP and possess intrinsic GTPase activity. Activates MAPK1/MAPK3 resulting in phosphorylation and ultimately degradation of GJA1 Plays a role in promoting oncogenic events by inducing transcriptional silencing of tumor suppressor genes (TSGs) in colorectal cancer (CRC) cells in a ZNF304-dependent manner Recognized by LZTR1 that mediates its ubiquitination by a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex

Degradation Pathway

NameUbiquitin-Proteasome Pathway
Assay MethodWB

Mechanism

The ubiquitin-proteasome pathway (UPP) constitutes the principal pathway for protein degradation in eukaryotic cells, mediating the breakdown of target proteins through ubiquitin tagging and subsequent proteasomal degradation. In an ATP-dependent manner, the ubiquitin-activating enzyme (E1) activates ubiquitin (Ub) and conjugates it to a ubiquitin-conjugating enzyme (E2). E3 ligase subsequently catalyzes the transfer of Ub to the target protein, leading to the formation of a polyubiquitin chain that completes the ubiquitination mark. The 19S regulatory particle of the 26S proteasome recognizes this ubiquitination signal and, after deubiquitination, mediates the ATP-dependent delivery of the substrate into the 20S proteasome for degradation

Description

Encouraged by the obvious increase in the ubiquitin level in the HY8-treated group, we further performed rescue assays (Figures 4D and S5). Cotreatment with the proteasome inhibitor MG132 blocked KRAS degradation, indicating that the engagement of proteasome pathway is required. In contrast, cotreatment with the lysosomal inhibitor bafilomycin A1 (Baf A1) had no effect on KRAS degradation, suggesting the autophagy/lysosome pathway is not involved in carborane-induced KRAS degradation

Activity Data

TypeDC50
Value<50 µM
POI NameKARS G12C
Cell LineNCI-H23
Cell Line IDCVCL_1547
Assay MethodWB
Reference10.1021/acsbiomedchemau.6c00004

Description

Subsequently, all of the conjugates were examined by Western blotting to evaluate their ability to induce KRASG12C degradation in cells (Figure2). Analysis of the correlation between cytotoxicity and KRAS G12C degradation indicates that target degradation does not necessarily result in cytotoxicity. Partial degradation of the target protein (approximately 60% degradation of KRAS G12C upon HY8 treatment) may be insufficient to induce cytotoxic effects, particularly in KRAS-driven cancer cells that exhibit strong pathway redundancy

Disease Information

DiseaseICD-11Source
Cardio-facio-cutaneous syndromeLD27.0YGene-Disease Association
Encephalocraniocutaneous lipomatosisEF02.1Gene-Disease Association
Familial pancreatic carcinoma2C10.Y&XH63D2Gene-Disease Association
Juvenile myelomonocytic leukaemia2A42Gene-Disease Association
Noonan syndromeLD2F.15Gene-Disease Association
Pilocytic astrocytomaXH12D2Gene-Disease Association
Schimmelpenning-Feuerstein-Mims SyndromeLD2D.YGene-Disease Association
Malignant neoplasms of stomach2B72Gene-Disease Association
Arteriovenous malformation of brain8B22.40Gene-Disease Association
Malignant neoplasm of pancreas2C10Gene-Disease Association